gamma2-Solamarine

Common Name

gamma2-Solamarine Description

gamma2-Solamarine is found in root vegetables. gamma2-Solamarine is an alkaloid from Solanum juzepczukii (bitter potato) gamma2-Solamarine belongs to the family of Triterpene Glycosides. These are triterpenes in which an isoprene unit is glycosylated. Structure

MOLSDFPDBSMILESInChI

Structure for HMDB29371 (gamma2-Solamarine)

Synonyms

Value Source g-SolamarineHMDB g2-SolamarineHMDB KhasianineMeSH L-Rhamnopyranosyl-14-D-glucopyranose solasodineMeSH

Chemical Formlia

C39H63NO11 Average Molecliar Weight

721.9176 Monoisotopic Molecliar Weight

721.440111863 IUPAC Name

2-{[4,5-dihydroxy-2-(hydroxymethyl)-6-{5,7,9,13-tetramethyl-5-oxaspiro[pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane-6,2-piperidin]-18-eneoxy}oxan-3-yl]oxy}-6-methyloxane-3,4,5-triol Traditional Name

2-{[4,5-dihydroxy-2-(hydroxymethyl)-6-{5,7,9,13-tetramethyl-5-oxaspiro[pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane-6,2-piperidin]-18-eneoxy}oxan-3-yl]oxy}-6-methyloxane-3,4,5-triol CAS Registry Number

11034-34-7 SMILES

CC1C2C(CC3C4CC=C5CC(CCC5(C)C4CCC23C)OC2OC(CO)C(OC3OC(C)C(O)C(O)C3O)C(O)C2O)OC11CCC(C)CN1

InChI Identifier

InChI=1S/C39H63NO11/c1-18-8-13-39(40-16-18)19(2)28-26(51-39)15-25-23-7-6-21-14-22(9-11-37(21,4)24(23)10-12-38(25,28)5)48-36-33(46)31(44)34(27(17-41)49-36)50-35-32(45)30(43)29(42)20(3)47-35/h6,18-20,22-36,40-46H,7-17H2,1-5H3

InChI Key

KRQDMAXNTWLTDZ-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative. Kingdom

Chemical entities Super Class

Organic compounds Class

Lipids and lipid-like moleclies Sub Class

Steroids and steroid derivatives Direct Parent

Steroidal saponins Alternative Parents

  • Diterpene glycosides
  • Spirosolanes and derivatives
  • Azasteroids and derivatives
  • Delta-5-steroids
  • Diterpenoids
  • Disaccharides
  • O-glycosyl compounds
  • Azaspirodecane derivatives
  • Alkaloids and derivatives
  • Piperidines
  • Oxanes
  • Tetrahydrofurans
  • Hemiaminals
  • Secondary alcohols
  • Oxacyclic compounds
  • Acetals
  • Polyols
  • Azacyclic compounds
  • Primary alcohols
  • Hydrocarbon derivatives
  • Organopnictogen compounds
  • Substituents

  • Steroidal saponin
  • Diterpene glycoside
  • Spirosolane skeleton
  • Diterpenoid
  • Steroidal alkaloid
  • Azasteroid
  • Delta-5-steroid
  • Terpene glycoside
  • Disaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Azaspirodecane
  • Alkaloid or derivatives
  • Oxane
  • Piperidine
  • Tetrahydrofuran
  • Secondary alcohol
  • Hemiaminal
  • Acetal
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Polyol
  • Alcohol
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic nitrogen compound
  • Primary alcohol
  • Organic oxygen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
  • Molecliar Framework

    Aliphatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

  • Cell signaling
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane integrity/stability
  • Application

  • Nutrient
  • Stabilizers
  • Surfactants and Emlisifiers
  • Cellliar locations

  • Cytoplasm
  • Extracellliar
  • Membrane
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting Point243 – 248 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.066 mg/mLALOGPS logP2.07ALOGPS logP2.12ChemAxon logS-4ALOGPS pKa (Strongest Acidic)11.95ChemAxon pKa (Strongest Basic)9.54ChemAxon Physiological Charge1ChemAxon Hydrogen Acceptor Count12ChemAxon Hydrogen Donor Count7ChemAxon Polar Surface Area179.56 Å2ChemAxon Rotatable Bond Count5ChemAxon Refractivity185.23 m3·mol-1ChemAxon Polarizability81.54 Å3ChemAxon Number of Rings8ChemAxon Bioavailability0ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Extracellliar
  • Membrane
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000441 KNApSAcK ID

    Not Available Chemspider ID

    2720519 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29371 Metagene Link

    HMDB29371 METLIN ID

    Not Available PubChem Compound

    3479482 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: Selonsertib

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 16950502

    gamma2-Solamarine

    Common Name

    gamma2-Solamarine Description

    gamma2-Solamarine is found in root vegetables. gamma2-Solamarine is an alkaloid from Solanum juzepczukii (bitter potato) gamma2-Solamarine belongs to the family of Triterpene Glycosides. These are triterpenes in which an isoprene unit is glycosylated. Structure

    MOLSDFPDBSMILESInChI

    Structure for HMDB29371 (gamma2-Solamarine)

    Synonyms

    Value Source g-SolamarineHMDB g2-SolamarineHMDB KhasianineMeSH L-Rhamnopyranosyl-14-D-glucopyranose solasodineMeSH

    Chemical Formlia

    C39H63NO11 Average Molecliar Weight

    721.9176 Monoisotopic Molecliar Weight

    721.440111863 IUPAC Name

    2-{[4,5-dihydroxy-2-(hydroxymethyl)-6-{5,7,9,13-tetramethyl-5-oxaspiro[pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane-6,2-piperidin]-18-eneoxy}oxan-3-yl]oxy}-6-methyloxane-3,4,5-triol Traditional Name

    2-{[4,5-dihydroxy-2-(hydroxymethyl)-6-{5,7,9,13-tetramethyl-5-oxaspiro[pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane-6,2-piperidin]-18-eneoxy}oxan-3-yl]oxy}-6-methyloxane-3,4,5-triol CAS Registry Number

    11034-34-7 SMILES

    CC1C2C(CC3C4CC=C5CC(CCC5(C)C4CCC23C)OC2OC(CO)C(OC3OC(C)C(O)C(O)C3O)C(O)C2O)OC11CCC(C)CN1

    InChI Identifier

    InChI=1S/C39H63NO11/c1-18-8-13-39(40-16-18)19(2)28-26(51-39)15-25-23-7-6-21-14-22(9-11-37(21,4)24(23)10-12-38(25,28)5)48-36-33(46)31(44)34(27(17-41)49-36)50-35-32(45)30(43)29(42)20(3)47-35/h6,18-20,22-36,40-46H,7-17H2,1-5H3

    InChI Key

    KRQDMAXNTWLTDZ-UHFFFAOYSA-N Chemical Taxonomy Description

    This compound belongs to the class of chemical entities known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative. Kingdom

    Chemical entities Super Class

    Organic compounds Class

    Lipids and lipid-like moleclies Sub Class

    Steroids and steroid derivatives Direct Parent

    Steroidal saponins Alternative Parents

  • Diterpene glycosides
  • Spirosolanes and derivatives
  • Azasteroids and derivatives
  • Delta-5-steroids
  • Diterpenoids
  • Disaccharides
  • O-glycosyl compounds
  • Azaspirodecane derivatives
  • Alkaloids and derivatives
  • Piperidines
  • Oxanes
  • Tetrahydrofurans
  • Hemiaminals
  • Secondary alcohols
  • Oxacyclic compounds
  • Acetals
  • Polyols
  • Azacyclic compounds
  • Primary alcohols
  • Hydrocarbon derivatives
  • Organopnictogen compounds
  • Substituents

  • Steroidal saponin
  • Diterpene glycoside
  • Spirosolane skeleton
  • Diterpenoid
  • Steroidal alkaloid
  • Azasteroid
  • Delta-5-steroid
  • Terpene glycoside
  • Disaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Azaspirodecane
  • Alkaloid or derivatives
  • Oxane
  • Piperidine
  • Tetrahydrofuran
  • Secondary alcohol
  • Hemiaminal
  • Acetal
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Polyol
  • Alcohol
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic nitrogen compound
  • Primary alcohol
  • Organic oxygen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
  • Molecliar Framework

    Aliphatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

  • Cell signaling
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane integrity/stability
  • Application

  • Nutrient
  • Stabilizers
  • Surfactants and Emlisifiers
  • Cellliar locations

  • Cytoplasm
  • Extracellliar
  • Membrane
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting Point243 – 248 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.066 mg/mLALOGPS logP2.07ALOGPS logP2.12ChemAxon logS-4ALOGPS pKa (Strongest Acidic)11.95ChemAxon pKa (Strongest Basic)9.54ChemAxon Physiological Charge1ChemAxon Hydrogen Acceptor Count12ChemAxon Hydrogen Donor Count7ChemAxon Polar Surface Area179.56 Å2ChemAxon Rotatable Bond Count5ChemAxon Refractivity185.23 m3·mol-1ChemAxon Polarizability81.54 Å3ChemAxon Number of Rings8ChemAxon Bioavailability0ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Extracellliar
  • Membrane
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000441 KNApSAcK ID

    Not Available Chemspider ID

    2720519 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29371 Metagene Link

    HMDB29371 METLIN ID

    Not Available PubChem Compound

    3479482 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: Selonsertib

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 16950502